Metagenomics data analysis

  • Teaching

    Details

    Faculty Faculty of Science and Medicine
    Domain Biology
    Code UE-SBL.00425
    Languages English
    Type of lesson Lecture
    Level Master
    Semester SP-2020

    Title

    French Analyse de données métagénomiques
    German Analyse von Metagenomischen Daten
    English Metagenomics data analysis

    Schedules and rooms

    Summary schedule Tuesday 13:15 - 15:00, Hebdomadaire (Spring semester)

    Teaching

    Responsibles
    • Falquet Laurent
    Teachers
    • Falquet Laurent
    Description

    Students will learn the basic principles of metagenomics data analysis and their associated methods. The course will cover the targeted methods (16S, ITS) as well as the Whole Genome/Transcriptome Sequencing methods, both in prokaryotes and eukaryotes. Students will learn which kind of data could be extracted from metagenomics analysis and how to analyze and represent these data.
     
    Condition of access

    Prerequisite: BC.7106
    Softskills No
    Off field No
    BeNeFri No
    Mobility No
    UniPop No
  • Dates and rooms
    Date Hour Type of lesson Place
    18.02.2020 13:15 - 15:00 Cours PER 01, Room 0.367
    25.02.2020 13:15 - 15:00 Cours PER 01, Room 0.367
    03.03.2020 13:15 - 15:00 Cours PER 01, Room 0.367
    10.03.2020 13:15 - 15:00 Cours PER 01, Room 0.367
    17.03.2020 13:15 - 15:00 Cours PER 01, Room 0.367
    24.03.2020 13:15 - 15:00 Cours PER 01, Room 0.367
    31.03.2020 13:15 - 15:00 Cours PER 01, Room 0.367
    07.04.2020 13:15 - 15:00 Cours PER 01, Room 0.367
    21.04.2020 13:15 - 15:00 Cours PER 01, Room 0.367
    28.04.2020 13:15 - 15:00 Cours PER 01, Room 0.367
    05.05.2020 13:15 - 15:00 Cours PER 01, Room 0.367
    12.05.2020 13:15 - 15:00 Cours PER 01, Room 0.367
    19.05.2020 13:15 - 15:00 Cours PER 01, Room 0.367
    26.05.2020 13:15 - 15:00 Cours PER 01, Room 0.367
  • Assessments methods

    Examen - SP-2020, Session d'été 2020

    Assessments methods By rating
    Descriptions of Exams

    COVID-19 - SS2020 / Exam session SUMMER 2020

    Oral Online-Exam

    Duration: 20 minutes

     

     

    Oral (20 min) or written (60 min) exam

    Examen - SP-2020, Autumn Session 2020

    Assessments methods By rating
    Descriptions of Exams

    COVID-19 - SS2020 / Exam session SUMMER 2020

    Oral Online-Exam

    Duration: 20 minutes

     

     

    Oral (20 min) or written (60 min) exam
  • Assignment
    Valid for the following curricula:
    Additional Courses in Sciences
    Version: ens_compl_sciences
    Paquet indépendant des branches > Specialized courses in Biology (Master level)
    Additional programme requirements for PhD studies [PRE-DOC]
    Version: 2020_1/v_01
    Additional programme requirements for PhD studies (Faculty of Science and Medicine) > Specialized courses in Biology (Master level)
    Biology [3e cycle]
    Version: 2015_1/V_01
    Continuing education > Specialized courses in Biology (Master level)
    Biology [POST-DOC]
    Version: 2015_1/V_01
    Continuing education > Specialized courses in Biology (Master level)
    MSc in Bioinformatics and Computational Biology [MA] 120
    Version: 2023_1/V_01
    MSc in Bioinformatics and computational biology, courses > MSc-BI, Module “Genomics” (from AS2020 on)
    MSc in Environmental Biology, option Applied Environmental Biology 120 [MA]
    Version: 2022_1/V_01
    MSc in Environmental Biology, option Applied Environmental Biology, lectures and seminars (from AS2021 on) > MSc-EB, option Applied Environmental Biology, elective courses (from AS2022 on) > Recommended courses
    MSc in Environmental Biology, option Ecology and Evolution 120 [MA]
    Version: 2022_1/V_01
    MSc in Environmental Biology, option Ecology and Evolution, lectures and seminars (from AS2021 on) > MSc-EB, option Ecology and Evolution, elective courses (from AS2022 on) > elective courses
    MSc in Environmental Biology, option Plant and Microbial Sciences 120 [MA]
    Version: 2022_1/V_01
    MSc in Environmental Biology, option Plant and Microbial Sciences, lectures and seminars (from AS2021 on) > MSc-EB, option Plant and Microbial Sciences, elective courses (from AS2022 on) > Recommended courses
    MSc in Environmental Biology, option Teaching 90 [MA]
    Version: 2023_1/V_01
    MSc in Environmental Biology, option Teaching, lectures and seminars (from AS2021 on) > MSc-EB, option Teaching, elective courses (from AS2023 on) > elective courses
    MSc in Molecular Life and Health Sciences, option Biochemistry and Cell Biology 120 [MA]
    Version: 2022_1/V_01
    MSc in Molecular Life and Health Sciences, option Biochemistry and Cell Biology, lectures and seminars (from AS2021 on) > MSc-ML, option Biochemistry and Cell Biology, elective courses (from AS2021 on) > Recommended courses
    MSc in Molecular Life and Health Sciences, option Developmental Biology and Regeneration 120 [MA]
    Version: 2022_1/V_01
    MSc in Molecular Life and Health Sciences, option Developmental Biology and Regeneration, lectures and seminars (from AS2021 on) > MSc-ML, option Developmental Biology and Regeneration, elective courses (from AS2021 on) > elective courses
    MSc in Molecular Life and Health Sciences, option Marine Biology 120 [MA]
    Version: 2022_1/V_01
    MSc in Molecular Life and Health Sciences, option Marine Biology, lectures and seminars (from AS2021 on) > MSc-ML, option Marine Biology, elective courses (from AS2021 on) > elective courses
    MSc in Molecular Life and Health Sciences, option Neurobiology 120 [MA]
    Version: 2022_1/V_01
    MSc in Molecular Life and Health Sciences, option Neurobiology, lectures and seminars (from AS2021 on) > MSc-ML, option Neurobiology, elective courses (from AS2021 on) > elective courses
    MSc in Molecular Life and Health Sciences, option Teaching 90 [MA]
    Version: 2023_1/V_01
    MSc in Molecular Life and Health Sciences, option Teaching, lectures and seminars (from AS2021 on) > MSc-ML, option Teaching, elective courses (from AS2023 on) > elective courses