Details

Faculty	Faculty of Science and Medicine
Domain	Biochemistry
Code	UE-SBC.07005
Languages	English
Type of lesson	Lecture Exercise
Level	Bachelor
Semester	AS-2022

Title

French	Bioinformatique et génomique avancées
German	Fortgeschrittene Bioinformatik und Genomik
English	Advanced bioinformatics and genomics

Schedules and rooms

Summary schedule	Tuesday 10:15 - 12:00, Cours bloc (Autumn semester) Friday 13:15 - 15:00, Cours bloc (Autumn semester)
Struct. of the schedule	weekly lecture 16 hours + exercises 16 hours
Contact's hours	32

Teaching

Responsibles	Falquet Laurent
Teachers	Falquet Laurent
Description	This class is a direct follow up of the basic class SBC.07004. It goes deeper in the Next Generation Sequencing applications methods, like de novo genome and transcriptome assembly & annotation, remapping & variants identification, transcriptomics, ChIPseq & related methods, epigenomics, microbiome & metagenomics, population genomics.   Each week one main concept is detailed, explaining the algorithms of the most important methods with a particular look at their advantages and drawbacks. Each week practical exercises directly connected to the theoretical lectures are used to strengthen the learning by leveraging on simple web tools whenever possible.
Comments	Prérequis: SBC.07004 Attention: ne peut pas être pris conjointement à SBC.07003 La présence aux sessions d'exercices est recommandée.
Softskills	No
Off field	Yes
BeNeFri	Yes
Mobility	Yes
UniPop	No

Written exam - AS-2022, Session d'hiver 2023

Date	16.02.2023 08:15 - 08:45
Assessments methods	By rating
Descriptions of Exams	Epreuve écrite (30 minutes). Une note est attribuée.