Organization and annotation of eukaryote genomes

  • Teaching

    Details

    Faculty Faculty of Science and Medicine
    Domain Biology
    Code UE-SBL.30004
    Languages English
    Type of lesson Cours bloc
    Level Master
    Semester SA-2022

    Title

    French Organisation et annotation des génomes eukaryotiques
    German Organisation und Annotation von eukaryotischen Genomen
    English Organization and annotation of eukaryote genomes

    Schedules and rooms

    Summary schedule Wednesday 08:15 - 17:00, Hebdomadaire (Autumn semester)
    Struct. of the schedule cours bloc
    Contact's hours 48

    Teaching

    Responsibles
    Teachers
    Description

    (SBL.30004; 3 ECTS; lecture with exercises) This course examines the main evolutionary processes shaping the organization plant and animal genomes. It compares and operates complementary approaches to characterize gene models as well as transposable element in model and non-model organisms. Using adequate tools to identify duplicated sequences and ‘junk DNA’, it will also address how to benefit from genomic variation. A mix of lectures and practical exercises will enable students to take advantage of current approaches to robustly describe and understand Eukaryote genomes.

    Softskills
    No
    Off field
    Yes
    BeNeFri
    Yes
    Mobility
    Yes
    UniPop
    No
  • Dates and rooms
    Date Hour Type of lesson Place
    19.10.2022 08:15 - 17:00 Cours PER 21, Room E040
    26.10.2022 08:15 - 17:00 Cours PER 21, Room E040
    02.11.2022 08:15 - 17:00 Cours PER 21, Room E040
    09.11.2022 08:15 - 17:00 Cours PER 21, Room E040
    16.11.2022 08:15 - 17:00 Cours PER 21, Room G414
    23.11.2022 08:15 - 17:00 Cours PER 21, Room G414
  • Assessments methods

    Rapport

    Assessments methods By rating
    Descriptions of Exams

    Written exam (90 min.). One mark

    Modification of the evaluation modality (SA2022): report. One mark. 

  • Assignment
    Valid for the following curricula:
    Additional Courses in Sciences
    Version: ens_compl_sciences
    Paquet indépendant des branches > Specialized courses in Biology (Master level)

    Additional programme requirements for PhD studies [PRE-DOC]
    Version: 2020_1/v_01
    Additional programme requirements for PhD studies (Faculty of Science and Medicine) > Specialized courses in Biology (Master level)

    Biology [3e cycle]
    Version: 2015_1/V_01
    Continuing education > Specialized courses in Biology (Master level)

    Biology [POST-DOC]
    Version: 2015_1/V_01
    Continuing education > Specialized courses in Biology (Master level)

    MSc in Bioinformatics and Computational Biology [MA] 120
    Version: 2022_1/V_01
    MSc in Bioinformatics and computational biology, courses > MSc-BI, Module “Genomics” (form AS2020 on)

    MSc in Environmental Biology, option Applied Environmental Biology 120 [MA]
    Version: 2022_1/V_01
    MSc in Environmental Biology, option Applied Environmental Biology, lectures and seminars (from AS2021 on) > MSc-EB, option Applied Environmental Biology, elective courses (from AS2022 on) > elective courses

    MSc in Environmental Biology, option Ecology and Evolution 120 [MA]
    Version: 2022_1/V_01
    MSc in Environmental Biology, option Ecology and Evolution, lectures and seminars (from AS2021 on) > MSc-EB, option Ecology and Evolution, elective courses (from AS2022 on) > Recommended courses

    MSc in Environmental Biology, option Plant and Microbial Sciences 120 [MA]
    Version: 2022_1/V_01
    MSc in Environmental Biology, option Plant and Microbial Sciences, lectures and seminars (from AS2021 on) > MSc-EB, option Plant and Microbial Sciences, elective courses (from AS2022 on) > elective courses

    MSc in Environmental Biology, option Teaching 90 [MA]
    Version: 2022_1/V_01
    MSc in Environmental Biology, option Teaching, lectures and seminars (from AS2021 on) > MSc-EB, option Teaching, elective courses (from AS2022 on) > elective courses

    MSc in Molecular Life and Health Sciences, option Biochemistry and Cell Biology 120 [MA]
    Version: 2022_1/V_01
    MSc in Molecular Life and Health Sciences, option Biochemistry and Cell Biology, lectures and seminars (from AS2021 on) > MSc-ML, option Biochemistry and Cell Biology, elective courses (from AS2021 on) > elective courses

    MSc in Molecular Life and Health Sciences, option Developmental Biology and Regeneration 120 [MA]
    Version: 2022_1/V_01
    MSc in Molecular Life and Health Sciences, option Developmental Biology and Regeneration, lectures and seminars (from AS2021 on) > MSc-ML, option Developmental Biology and Regeneration, elective courses (from AS2021 on) > elective courses

    MSc in Molecular Life and Health Sciences, option Marine Biology 120 [MA]
    Version: 2022_1/V_01
    MSc in Molecular Life and Health Sciences, option Marine Biology, lectures and seminars (from AS2021 on) > MSc-ML, option Marine Biology, elective courses (from AS2021 on) > elective courses

    MSc in Molecular Life and Health Sciences, option Neurobiology 120 [MA]
    Version: 2022_1/V_01
    MSc in Molecular Life and Health Sciences, option Neurobiology, lectures and seminars (from AS2021 on) > MSc-ML, option Neurobiology, elective courses (from AS2021 on) > elective courses

    MSc in Molecular Life and Health Sciences, option Teaching 90 [MA]
    Version: 2022_1/V_01
    MSc in Molecular Life and Health Sciences, option Teaching, lectures and seminars (from AS2021 on) > MSc-ML, option Teaching, elective courses (from AS2021 on) > elective courses