Details

Faculty	Faculty of Science and Medicine
Domain	Biochemistry
Code	UE-SBC.07004
Languages	English
Type of lesson	Lecture Exercise
Level	Bachelor
Semester	AS-2022

Title

French	Bioinformatique et génomique de base
German	Grundlagen der Bioinformatik und Genomik
English	Basic bioinformatics and genomics

Schedules and rooms

Summary schedule	Tuesday 10:15 - 12:00, Cours bloc (Autumn semester) Friday 10:15 - 12:00, Cours bloc (Autumn semester) Friday 13:15 - 15:00, Cours bloc (Autumn semester)
Struct. of the schedule	weekly lecture 12 hours + exercises 12h
Contact's hours	24

Teaching

Responsibles	Falquet Laurent
Teachers	Falquet Laurent
Description	Knowledge of the basics on the origins and manipulations of biological sequence data is a must for any biomedical researcher. This class is oriented towards two main directions. First it introduces the basic concepts of DNA and protein sequences databases and analysis using bioinformatics tools (pairwise alignments, dotplots, multiple sequence alignments, searching databases with sequences, sequences motifs or Hidden Markov models). Secondly it introduces genomics concepts like the sequencing technologies, the human genome project, and the genome browsers. Each week one main concept is detailed, explaining the algorithms of the most important methods with a particular look at their advantages and drawbacks. Each week practical exercises directly connected to the theoretical lectures are used to strengthen the learning by leveraging on simple web tools.
Comments	Attention: ne peut pas être pris conjointement à SBC.07003 La présence aux sessions d'exercices est recommandée.
Softskills	No
Off field	Yes
BeNeFri	Yes
Mobility	Yes
UniPop	No

Written exam - AS-2022, Session d'hiver 2023

Date	16.02.2023 08:15 - 08:45
Assessments methods	By rating
Descriptions of Exams	Epreuve écrite (30 minutes). Une note est attribuée.

Written exam - SS-2023, Autumn Session 2023

Assessments methods	By rating
Descriptions of Exams	Epreuve écrite (30 minutes). Une note est attribuée.