Introduction to metabolomics: data acquisition and processing

  • Teaching

    Details

    Faculty Faculty of Science and Medicine
    Domain Biology
    Code UE-SBL.20004
    Languages English
    Type of lesson Practical work
    Lecture
    Level Master
    Semester SP-2023

    Title

    French Introduction à la métabolomique : acquisition et traitement des données
    German Einführung in die Metabolomik: Datenerfassung und -verarbeitung
    English Introduction to metabolomics: data acquisition and processing

    Schedules and rooms

    Summary schedule Wednesday 14:15 - 18:00, Hebdomadaire (Spring semester)
    Struct. of the schedule 4h par semaine
    Contact's hours 32

    Teaching

    Responsibles
    • Allard Pierre-Marie
    Teachers
    • Allard Pierre-Marie
    Description

    This course is a theoretical and practical introduction to metabolomics (the large scale study of small molecules in complex mixtures). It will cover extraction methods, sample preparation, separation techniques and chromatography, detection procedures and data analysis (quantitative and qualitative). A particular focus will be given to mass spectrometry based metabolomics of specialized metabolomes and its applications in environmental biology and natural products research. The course includes a practical part on GC or LC-MS (Gas Chromatography or Liquid Chromatography coupled to Mass Spectrometry) and data processing.

    Softskills No
    Off field Yes
    BeNeFri Yes
    Mobility Yes
    UniPop No
  • Dates and rooms
    Date Hour Type of lesson Place
    22.03.2023 14:15 - 18:00 Cours PER 04, Room 0.109
    29.03.2023 14:15 - 18:00 Cours PER 04, Room 0.109
    05.04.2023 14:15 - 18:00 Cours PER 04, Room 0.109
    19.04.2023 14:15 - 18:00 Cours PER 04, Room 0.109
    26.04.2023 14:15 - 18:00 Cours PER 04, Room 0.109
    03.05.2023 14:15 - 18:00 Cours PER 04, Room 0.109
    10.05.2023 14:15 - 18:00 Cours PER 04, Room 0.109
    17.05.2023 14:15 - 18:00 Cours PER 04, Room 0.109
  • Assessments methods

    Oral exam - SP-2023, Session d'été 2023

    Date 13.06.2023 09:00 - 10:10
    Assessments methods By rating
    Descriptions of Exams

    Oral exam (20 min) at the exam session ; one mark.

    Oral exam - SP-2023, Autumn Session 2023

    Assessments methods By rating
    Descriptions of Exams

    Oral exam (20 min) at the exam session ; one mark.

  • Assignment
    Valid for the following curricula:
    Additional Courses in Sciences
    Version: ens_compl_sciences
    Paquet indépendant des branches > Specialized courses in Biology (Master level)

    Additional programme requirements for PhD studies [PRE-DOC]
    Version: 2020_1/v_01
    Additional programme requirements for PhD studies (Faculty of Science and Medicine) > Specialized courses in Biology (Master level)

    Biology [3e cycle]
    Version: 2015_1/V_01
    Continuing education > Specialized courses in Biology (Master level)

    Biology [POST-DOC]
    Version: 2015_1/V_01
    Continuing education > Specialized courses in Biology (Master level)

    MSc in Environmental Biology, option Applied Environmental Biology 120 [MA]
    Version: 2022_1/V_01
    MSc in Environmental Biology, option Applied Environmental Biology, lectures and seminars (from AS2021 on) > MSc-EB, option Applied Environmental Biology, elective courses (from AS2022 on) > Recommended courses

    MSc in Environmental Biology, option Ecology and Evolution 120 [MA]
    Version: 2022_1/V_01
    MSc in Environmental Biology, option Ecology and Evolution, lectures and seminars (from AS2021 on) > MSc-EB, option Ecology and Evolution, elective courses (from AS2022 on) > elective courses

    MSc in Environmental Biology, option Plant and Microbial Sciences 120 [MA]
    Version: 2022_1/V_01
    MSc in Environmental Biology, option Plant and Microbial Sciences, lectures and seminars (from AS2021 on) > MSc-EB, option Plant and Microbial Sciences, compulsory courses (from AS2022 on)

    MSc in Environmental Biology, option Teaching 90 [MA]
    Version: 2023_1/V_01
    MSc in Environmental Biology, option Teaching, lectures and seminars (from AS2021 on) > MSc-EB, option Teaching, elective courses (from AS2023 on) > elective courses

    MSc in Molecular Life and Health Sciences, option Biochemistry and Cell Biology 120 [MA]
    Version: 2022_1/V_01
    MSc in Molecular Life and Health Sciences, option Biochemistry and Cell Biology, lectures and seminars (from AS2021 on) > MSc-ML, option Biochemistry and Cell Biology, compulsory courses (from AS2021 on)

    MSc in Molecular Life and Health Sciences, option Developmental Biology and Regeneration 120 [MA]
    Version: 2022_1/V_01
    MSc in Molecular Life and Health Sciences, option Developmental Biology and Regeneration, lectures and seminars (from AS2021 on) > MSc-ML, option Developmental Biology and Regeneration, elective courses (from AS2021 on) > elective courses

    MSc in Molecular Life and Health Sciences, option Marine Biology 120 [MA]
    Version: 2022_1/V_01
    MSc in Molecular Life and Health Sciences, option Marine Biology, lectures and seminars (from AS2021 on) > MSc-ML, option Marine Biology, elective courses (from AS2021 on) > elective courses

    MSc in Molecular Life and Health Sciences, option Neurobiology 120 [MA]
    Version: 2022_1/V_01
    MSc in Molecular Life and Health Sciences, option Neurobiology, lectures and seminars (from AS2021 on) > MSc-ML, option Neurobiology, elective courses (from AS2021 on) > elective courses

    MSc in Molecular Life and Health Sciences, option Teaching 90 [MA]
    Version: 2023_1/V_01
    MSc in Molecular Life and Health Sciences, option Teaching, lectures and seminars (from AS2021 on) > MSc-ML, option Teaching, elective courses (from AS2023 on) > elective courses