Hoogewijs Group
Publications (peer-reviewed only)
Generation of renal Epo-producing cell lines by conditional gene tagging reveals rapid HIF-2 driven Epo kinetics, cell autonomous feedback regulation, and a telocyte phenotype
Imeri, F. and Nolan, K. A. and Bapst, A. M. and Santambrogio, S. and Abreu-Rodriguez, I. and Spielmann, P. and Pfundstein, S. and Libertini, S. and Crowther, L. and Orlando, I. M. C. and Dahl, S. L. and Keodara, A. and Kuo, W. and Kurtcuoglu, V. and Scholz, C. C. and Qi, W. and Hummler, E. and Hoogewijs, D. and Wenger, R. H.,
Kidney Int
(2018)
| Article
Exploring three different expression systems for recombinant expression of globins: Escherichia coli, Pichia pastoris and Spodoptera frugiperda
Bracke, A. and Hoogewijs, D. and Dewilde, S.,
Anal Biochem
543
(2018), 62-70
| Article
Identification of a new VHL exon and complex splicing alterations in familial erythrocytosis or von Hippel-Lindau disease
Lenglet, M. and Robriquet, F. and Schwarz, K. and Camps, C. and Couturier, A. and Hoogewijs, D. and Buffet, A. and Knight, S. J. L. and Gad, S. and Couve, S. and Chesnel, F. and Pacault, M. and Lindenbaum, P. and Job, S. and Dumont, S. and Besnard, T. and Cornec, M. and Dreau, H. and Pentony, M. and Kvikstad, E. and Deveaux, S. and Burnichon, N. and Ferlicot, S. and Vilaine, M. and Mazzella, J. M. and Airaud, F. and Garrec, C. and Heidet, L. and Irtan, S. and Mantadakis, E. and Bouchireb, K. and Debatin, K. M. and Redon, R. and Bezieau, S. and Bressac-de Paillerets, B. and Teh, B. T. and Girodon, F. and Randi, M. L. and Putti, M. C. and Bours, V. and Van Wijk, R. and Gothert, J. R. and Kattamis, A. and Janin, N. and Bento, C. and Taylor, J. C. and Arlot-Bonnemains, Y. and Richard, S. and Gimenez-Roqueplo, A. P. and Cario, H. and Gardie, B.,
Blood
132.5
(2018), 469-483
| Article
A search for molecular mechanisms underlying male idiopathic infertility
Bracke, A. and Peeters, K. and Punjabi, U. and Hoogewijs, D. and Dewilde, S.,
Reprod Biomed Online
36.3
(2018), 327-339
| Article
Transcriptome-based network analysis reveals renal cell type-specific dysregulation of hypoxia-associated transcripts
Shved, N. and Warsow, G. and Eichinger, F. and Hoogewijs, D. and Brandt, S. and Wild, P. and Kretzler, M. and Cohen, C. D. and Lindenmeyer, M. T.,
Sci Rep
7.1
(2017), 8576
| Article
Oxygen-dependent regulation of aquaporin-3 expression
Hoogewijs, D. and Vogler, M. and Zwenger, E. and Krull, S. and Zieseniss, A.,
Hypoxia
4
(2016), 91-97
| Article
ITGA6 is directly regulated by hypoxia-inducible factors and enriches for cancer stem cell activity and invasion in metastatic breast cancer models
Brooks, D. L. and Schwab, L. P. and Krutilina, R. and Parke, D. N. and Sethuraman, A. and Hoogewijs, D. and Schorg, A. and Gotwald, L. and Fan, M. and Wenger, R. H. and Seagroves, T. N.,
Mol Cancer
15
(2016), 26
| Article
Bidirectional signalling between EphA2 and ephrinA1 increases tubular cell attachment, laminin secretion and modulates erythropoietin expression after renal hypoxic injury
Rodriguez, S. and Rudloff, S. and Koenig, K. F. and Karthik, S. and Hoogewijs, D. and Huynh-Do, U.,
Pflugers Arch
468.8
(2016), 1433-48
| Article
Estrogen-dependent downregulation of hypoxia-inducible factor (HIF)-2alpha in invasive breast cancer cells
Fuady, J. H. and Gutsche, K. and Santambrogio, S. and Varga, Z. and Hoogewijs, D. and Wenger, R. H.,
Oncotarget
7.21
(2016), 31153-65
| Article
Frequently asked questions in hypoxia research
Wenger, R. H. and Kurtcuoglu, V. and Scholz, C. C. and Marti, H. H. and Hoogewijs, D.,
Hypoxia
3
(2015), 35-43
| Article
Induction of long noncoding RNA MALAT1 in hypoxic mice
Lelli, A. and Nolan, K. A. and Santambrogio, S. and Goncalves, A. F. and Schonenberger, M. J. and Guinot, A. and Frew, I. J. and Marti, H. H. and Hoogewijs, D. and Wenger, R. H.,
Hypoxia
3
(2015), 45-52
| Article
A globin domain in a neuronal transmembrane receptor of Caenorhabditis elegans and Ascaris suum: molecular modeling and functional properties
Tilleman, L. and Germani, F. and De Henau, S. and Helbo, S. and Desmet, F. and Berghmans, H. and Van Doorslaer, S. and Hoogewijs, D. and Schoofs, L. and Braeckman, B. P. and Moens, L. and Fago, A. and Dewilde, S.,
J Biol Chem
290.16
(2015), 10336-52
| Article
Destruction of a distal hypoxia response element abolishes trans-activation of the PAG1 gene mediated by HIF-independent chromatin looping
Schorg, A. and Santambrogio, S. and Platt, J. L. and Schodel, J. and Lindenmeyer, M. T. and Cohen, C. D. and Schrodter, K. and Mole, D. R. and Wenger, R. H. and Hoogewijs, D.,
Nucleic Acids Res
43.12
(2015), 5810-23
| Article
Hypoxia attenuates the proinflammatory response in colon cancer cells by regulating IkappaB
Muller-Edenborn, K. and Leger, K. and Glaus Garzon, J. F. and Oertli, C. and Mirsaidi, A. and Richards, P. J. and Rehrauer, H. and Spielmann, P. and Hoogewijs, D. and Borsig, L. and Hottiger, M. O. and Wenger, R. H.,
Oncotarget
6.24
(2015), 20288-301
| Article
Phylogeny of Echinoderm Hemoglobins
Christensen, A. B. and Herman, J. L. and Elphick, M. R. and Kober, K. M. and Janies, D. and Linchangco, G. and Semmens, D. C. and Bailly, X. and Vinogradov, S. N. and Hoogewijs, D.,
PLoS One
10.8
(2015), e0129668
| Article
Hemoglobins in the genome of the cryptomonad Guillardia theta
Smith, D. R. and Vinogradov, S. N. and Hoogewijs, D.,
Biol Direct
9
(2014), 7
| Article
The role of PHD2 mutations in the pathogenesis of erythrocytosis
Gardie, B. and Percy, M. J. and Hoogewijs, D. and Chowdhury, R. and Bento, C. and Arsenault, P. R. and Richard, S. and Almeida, H. and Ewing, J. and Lambert, F. and McMullin, M. F. and Schofield, C. J. and Lee, F. S.,
Hypoxia
2
(2014), 71-90
| Article
Hypoxia-inducible factor-mediated induction of WISP-2 contributes to attenuated progression of breast cancer
Fuady, J. H. and Bordoli, M. R. and Abreu-Rodriguez, I. and Kristiansen, G. and Hoogewijs, D. and Stiehl, D. P. and Wenger, R. H.,
Hypoxia
2
(2014), 23-33
| Article
A novel distal upstream hypoxia response element regulating oxygen-dependent erythropoietin gene expression
Storti, F. and Santambrogio, S. and Crowther, L. M. and Otto, T. and Abreu-Rodriguez, I. and Kaufmann, M. and Hu, C. J. and Dame, C. and Fandrey, J. and Wenger, R. H. and Hoogewijs, D.,
Haematologica
99.4
(2014), e45-8
| Article
Microbial eukaryote globins
Vinogradov, S. N. and Bailly, X. and Smith, D. R. and Tinajero-Trejo, M. and Poole, R. K. and Hoogewijs, D.,
Adv Microb Physiol
63
(2013), 391-446
| Article
Bacterial and archaeal globins - a revised perspective
Vinogradov, S. N. and Tinajero-Trejo, M. and Poole, R. K. and Hoogewijs, D.,
Biochim Biophys Acta
1834.9
(2013), 1789-800
| Article
GLB-13 is associated with oxidative stress resistance in Caenorhabditis elegans
Ren, C. and Li, Y. and Han, R. and Gao, D. and Li, W. and Shi, J. and Hoogewijs, D. and Braeckman, B. P. and De Henau, S. and Lu, Y. and Qu, W. and Gao, Y. and Wu, Y. and Li, Z. and Liu, H. and Wang, Z. and Zhang, C.,
IUBMB Life
65.5
(2013), 423-34
| Article
Breast tumor kinase (Brk/PTK6) is a mediator of hypoxia-associated breast cancer progression
Regan Anderson, T. M. and Peacock, D. L. and Daniel, A. R. and Hubbard, G. K. and Lofgren, K. A. and Girard, B. J. and Schorg, A. and Hoogewijs, D. and Wenger, R. H. and Seagroves, T. N. and Lange, C. A.,
Cancer Res
73.18
(2013), 5810-20
| Article
The evolution of land plant hemoglobins
Vazquez-Limon, C. and Hoogewijs, D. and Vinogradov, S. N. and Arredondo-Peter, R.,
Plant Sci
191-192
(2012), 71-81
| Article
Distinct deregulation of the hypoxia inducible factor by PHD2 mutants identified in germline DNA of patients with polycythemia
Ladroue, C. and Hoogewijs, D. and Gad, S. and Carcenac, R. and Storti, F. and Barrois, M. and Gimenez-Roqueplo, A. P. and Leporrier, M. and Casadevall, N. and Hermine, O. and Kiladjian, J. J. and Baruchel, A. and Fakhoury, F. and Bressac-de Paillerets, B. and Feunteun, J. and Mazure, N. and Pouyssegur, J. and Wenger, R. H. and Richard, S. and Gardie, B.,
Haematologica
97.1
(2012), 9-14
| Article
Androglobin: a chimeric globin in metazoans that is preferentially expressed in Mammalian testes
Hoogewijs, D. and Ebner, B. and Germani, F. and Hoffmann, F. G. and Fabrizius, A. and Moens, L. and Burmester, T. and Dewilde, S. and Storz, J. F. and Vinogradov, S. N. and Hankeln, T.,
Mol Biol Evol
29.4
(2012), 1105-14
| Article
A phylogenetic analysis of the globins in fungi
Hoogewijs, D. and Dewilde, S. and Vierstraete, A. and Moens, L. and Vinogradov, S. N.,
PLoS One
7.2
(2012), e31856
| Article
Evolution of the globin gene family in deuterostomes: lineage-specific patterns of diversification and attrition
Hoffmann, F. G. and Opazo, J. C. and Hoogewijs, D. and Hankeln, T. and Ebner, B. and Vinogradov, S. N. and Bailly, X. and Storz, J. F.,
Mol Biol Evol
29.7
(2012), 1735-45
| Article
What are the origins and phylogeny of plant hemoglobins?
Vinogradov, S. N. and Hoogewijs, D. and Arredondo-Peter, R.,
Commun Integr Biol
4.4
(2011), 443-5
| Article
Phylogenetic relationships of 3/3 and 2/2 hemoglobins in Archaeplastida genomes to bacterial and other eukaryote hemoglobins
Vinogradov, S. N. and Fernandez, I. and Hoogewijs, D. and Arredondo-Peter, R.,
Mol Plant
4.1
(2011), 42-58
| Article
Globins in Caenorhabditis elegans
Tilleman, L. and Germani, F. and De Henau, S. and Geuens, E. and Hoogewijs, D. and Braeckman, B. P. and Vanfleteren, J. R. and Moens, L. and Dewilde, S.,
IUBMB Life
63.3
(2011), 166-74
| Article
Electron transfer function versus oxygen delivery: a comparative study for several hexacoordinated globins across the animal kingdom
Kiger, L. and Tilleman, L. and Geuens, E. and Hoogewijs, D. and Lechauve, C. and Moens, L. and Dewilde, S. and Marden, M. C.,
PLoS One
6.6
(2011), e20478
| Article
The putative RNA helicase HELZ promotes cell proliferation, translation initiation and ribosomal protein S6 phosphorylation
Hasgall, P. A. and Hoogewijs, D. and Faza, M. B. and Panse, V. G. and Wenger, R. H. and Camenisch, G.,
PLoS One
6.7
(2011), e22107
| Article
Globin-like proteins in Caenorhabditis elegans: in vivo localization, ligand binding and structural properties
Geuens, E. and Hoogewijs, D. and Nardini, M. and Vinck, E. and Pesce, A. and Kiger, L. and Fago, A. and Tilleman, L. and De Henau, S. and Marden, M. C. and Weber, R. E. and Van Doorslaer, S. and Vanfleteren, J. and Moens, L. and Bolognesi, M. and Dewilde, S.,
BMC Biochem
11
(2010), 17
| Article
Regulated oxygen sensing by protein hydroxylation in renal erythropoietin-producing cells
Wenger, R. H. and Hoogewijs, D.,
Am J Physiol Renal Physiol
298.6
(2010), F1287-96
| Article
Selection and validation of a set of reliable reference genes for quantitative sod gene expression analysis in C. elegans
Hoogewijs, D. and Houthoofd, K. and Matthijssens, F. and Vandesompele, J. and Vanfleteren, J. R.,
BMC Mol Biol
9
(2008), 9
| Article
The Caenorhabditis globin gene family reveals extensive nematode-specific radiation and diversification
Hoogewijs, D. and De Henau, S. and Dewilde, S. and Moens, L. and Couvreur, M. and Borgonie, G. and Vinogradov, S. N. and Roy, S. W. and Vanfleteren, J. R.,
BMC Evol Biol
8
(2008), 279
| Article
Dietary restriction by growth in axenic medium induces discrete changes in the transcriptional output of genes involved in energy metabolism in Caenorhabditis elegans
Castelein, N. and Hoogewijs, D. and De Vreese, A. and Braeckman, B. P. and Vanfleteren, J. R.,
Biotechnol J
3.6
(2008), 803-12
| Article
Wide diversity in structure and expression profiles among members of the Caenorhabditis elegans globin protein family
Hoogewijs, D. and Geuens, E. and Dewilde, S. and Vierstraete, A. and Moens, L. and Vinogradov, S. and Vanfleteren, J. R.,
BMC Genomics
8
(2007), 356
| Article
A model of globin evolution
Vinogradov, S. N. and Hoogewijs, D. and Bailly, X. and Mizuguchi, K. and Dewilde, S. and Moens, L. and Vanfleteren, J. R.,
Gene
398.1-2
(2007), 132-42
| Article
Neuroglobin and cytoglobin as potential enzyme or substrate
Trandafir, F. and Hoogewijs, D. and Altieri, F. and Rivetti di Val Cervo, P. and Ramser, K. and Van Doorslaer, S. and Vanfleteren, J. R. and Moens, L. and Dewilde, S.,
Gene
398.1-2
(2007), 103-13
| Article
Characterization of a globin-coupled oxygen sensor with a gene-regulating function
Thijs, L. and Vinck, E. and Bolli, A. and Trandafir, F. and Wan, X. and Hoogewijs, D. and Coletta, M. and Fago, A. and Weber, R. E. and Van Doorslaer, S. and Ascenzi, P. and Alam, M. and Moens, L. and Dewilde, S.,
J Biol Chem
282.52
(2007), 37325-40
| Article
From critters to cancers: bridging comparative and clinical research on oxygen sensing, HIF signaling, and adaptations towards hypoxia
Hoogewijs, D. and Terwilliger, N. B. and Webster, K. A. and Powell-Coffman, J. A. and Tokishita, S. and Yamagata, H. and Hankeln, T. and Burmester, T. and Rytkonen, K. T. and Nikinmaa, M. and Abele, D. and Heise, K. and Lucassen, M. and Fandrey, J. and Maxwell, P. H. and Pahlman, S. and Gorr, T. A.,
Integr Comp Biol
47.4
(2007), 552-77
| Article
A phylogenomic profile of globins
Vinogradov, S. N. and Hoogewijs, D. and Bailly, X. and Arredondo-Peter, R. and Gough, J. and Dewilde, S. and Moens, L. and Vanfleteren, J. R.,
BMC Evol Biol
6
(2006), 31
| Article
Three globin lineages belonging to two structural classes in genomes from the three kingdoms of life
Vinogradov, S. N. and Hoogewijs, D. and Bailly, X. and Arredondo-Peter, R. and Guertin, M. and Gough, J. and Dewilde, S. and Moens, L. and Vanfleteren, J. R.,
Proc Natl Acad Sci U S A
102.32
(2005), 11385-9
| Article
Modulation of oxygen binding to insect hemoglobins: the structure of hemoglobin from the botfly Gasterophilus intestinalis
Pesce, A. and Nardini, M. and Dewilde, S. and Hoogewijs, D. and Ascenzi, P. and Moens, L. and Bolognesi, M.,
Protein Sci
14.12
(2005), 3057-63
| Article
Metabolism, physiology and stress defense in three aging Ins/IGF-1 mutants of the nematode Caenorhabditis elegans
Houthoofd, K. and Fidalgo, M. A. and Hoogewijs, D. and Braeckman, B. P. and Lenaerts, I. and Brys, K. and Matthijssens, F. and De Vreese, A. and Van Eygen, S. and Munoz, M. J. and Vanfleteren, J. R.,
Aging Cell
4.2
(2005), 87-95
| Article
Genome-wide analysis of the globin gene family of C. elegans
Hoogewijs, D. and Geuens, E. and Dewilde, S. and Moens, L. and Vierstraete, A. and Vinogradov, S. and Vanfleteren, J.,
IUBMB Life
56.11-12
(2004), 697-702
| Article
Nerve globins in invertebrates
Geuens, E. and Dewilde, S. and Hoogewijs, D. and Pesce, A. and Nienhaus, K. and Nienhaus, G. U. and Olson, J. and Vanfleteren, J. and Bolognesi, M. and Moens, L.,
IUBMB Life
56.11-12
(2004), 653-6
| Article
